Function reference by moduleΒΆ
- Matlab datafile IO (spynal.matIO)
- Spiking data analysis & processing (spynal.spikes)
- Overview
- Function list
- Function reference
rate()bin_rate()psth()density()isi()interspike_interval()rate_stats()isi_stats()burst_fract()waveform_stats()trough_to_peak_width()trough_width()repolarization_time()trough_peak_amp_ratio()bool_to_times()times_to_bool()cut_trials()select_time_range()realign_data()realign_data_on_event()pool_electrode_units()plot_raster()plot_mean_waveforms()plot_waveform_heatmap()simulate_spike_rates()simulate_spike_trains()simulate_spike_waveforms()
- Spectral analysis & continous data processing (spynal.spectra)
- Overview
- Function list
- Dependencies
- Function reference
- Wavelet spectral analysis (spynal.spectra.wavelet)
- Multitaper spectral analysis (spynal.spectra.multitaper)
- Bandpass-filter spectral analysis (spynal.spectra.bandfilter)
- Continuous data preprocessing (spynal.spectra.preprocess)
- Spectral data postprocessing (psynal.spectra.postprocess)
- General spectral analysis utilities (spynal.spectra.utils)
spectrum()spectrogram()power_spectrum()power_spectrogram()phase_spectrogram()itpc()intertrial_phase_clustering()burst_analysis()plot_spectrum()plot_spectrogram()
- Oscillatory neural synchrony (spynal.sync)
- Neural information measures (spynal.info)
- Randomization statistics (spynal.randstats)
- Overview
- Function list
- Function reference
- Sampling for randomization statistics (spynal.randstats.sampling)
- Permutation/shuffle tests (spynal.randstats.permutation)
- Bootstrap tests (spynal.randstats.bootstrap)
- Randomization statistics utilities (spynal.randstats.utils)
one_sample_test()paired_sample_test()paired_sample_test_labels()paired_sample_association_test()paired_sample_association_test_labels()two_sample_test()two_sample_test_labels()one_way_test()two_way_test()one_sample_confints()paired_sample_confints()two_sample_confints()
- Plotting functions and utilities (spynal.plots)
- General utility functions (spynal.utils)
- Overview
- Function list
- Function reference
zscore()fano()fano_factor()cv()coefficient_of_variation()cv2()lv()one_sample_tstat()paired_tstat()two_sample_tstat()one_way_fstat()two_way_fstat()correlation()rank_correlation()set_random_seed()randperm()interp1()gaussian()gaussian_1d()gaussian_2d()gaussian_nd()is_symmetric()is_positive_definite()setup_sliding_windows()index_axis()axis_index_slices()standardize_array()undo_standardize_array()data_labels_to_data_groups()data_groups_to_data_labels()iarange()unsorted_unique()isarraylike()isnumeric()isunix()ismac()ispc()object_array_equal()object_array_compare()concatenate_object_array()